Bringing you closer
to your data
BeoGenomics is a bioinformatics company that works with genomic data: NGS, SNP chip and GeneChip data. Using secure in-house and cloud based computing resources, our bioinformaticians are here to help you construct and run analysis pipelines, and develop the software tools needed to get the analysis done. Please feel free to contact us if you have any questions about how we can help you come closer to your data.
Secondary and tertiary analysis of genomic data is pivotal for a clearer understanding of how an organism can utilize it's genome. With secondary analysis, we can perform sample genome reconstruction. Depending on the source of genomic data and the nature of the analysis, two methods can be applied: read alignment and contig assembly.
Upon sample genome reconstruction, a selection of filtering tools can be applied to increase the quality of the reconstructed sample genome. Further steps may include calling and annotating variants and finally tertiary analysis; analyzing the affects that the called variants may have on the organism.
Using in-house computational resources or your own, we can help you build and run custom tailored analysis pipelines, and analyze the quality of your data and the affects it might have on your sample organism. Some of the secondary analysis pipelines that we support here at BeoGenomics are:
1. WGS (Whole Genome Sequencing)
2. WES (Whole Exome Sequencing)
3. TS (Targetted Resequencing)
4. Somatic Calling
5. CNV and SV Calling
6. RNAseq Transcript Quantitation
7. RNAseq Differential Expression
Additionally, at BeoGenomics we also support:
1. Clinical and diagnostic annotations of variants
2. SNP Genotype analysis
3. Imputation of missing SNP genotypes
At BeoGenomics we focus on not only implementing, but also developing the right tools for your job. With enormous amounts of genomic data being produced, we are presented with the need to process, manage and analyze this data.
Bioinformatics software development at BeoGenomics is divided into four key domains:
1. Data generation (data from existing data)
- quality control
- data format manipulation
- variant calling
- diagnostics etc...
2. Data presentation
- filtering data
- searching/querying through data etc...
3. Data storage (archiving genomic data)
- Cloud solutions or
- HPC solutions design and deployment
Specialized software development is part of the core of our business. Let us help you get the job done by developing custom tailored software solutions for you and your data.
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